\pdfminorversion=4
\documentclass{tomibeamer}
% If you need always a logo on each slide you can set this here.
% But good presenters mention that this is not required and consumes valuable space
%\logo{\includegraphics[scale=0.3]{logo-nuig.jpg}}
% not sure if we ever need this, any use did not provide anything different
\mode<presentation>{}
% listing lstlisting : use \begin{frame}[fragile,allowframebreaks]{\insertsectionhead}
%% Cheat sheet end
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%% Title, Author, etc
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% The images on the front slide need to be adjusted in the tomibeamer.cls file.
\date{\today}
\author{
K. Neuhaus$^1$, R. Dsouza$^1$, S. O'Gorman$^1$, Dr.~S.~Alexandrov$^1$, Prof.~Dr.~M.~Leahy$^1$
}
\institute{$^1$National University of Ireland, Galway}
\title{Template Slides TOMI}%%%%%%%%%%%%%%%%%%%%%
\subtitle{Tissue Optics and Microcirculation Imaging}
%%%%%%%%%%%%%%%%%
\begin{document}
% end numbering at last slide but increase for appendix
%%%% This must be here as it would not work otherwise, but beamer is a hack anyway. (What about pandoc ???)
\renewcommand*{\inserttotalframenumber}{\pageref{lastframe}}
%% title slide!
\begin{frame}
\vspace{-1.0cm}
% where to set the title? --> occur \title{
% see above for author, data, institute, ...
\titlepage
%\maketitle
\end{frame}
%% Outline slide
\begin{frame}{\vspace{-10pt}Outline}
%\frametitle{Table of Contents}
\vspace{-20pt}
\tableofcontents
\end{frame}
%%%%%%%%%%%%%%%%%5
\section{Slide Set One}
%% Section Slide
% not essential but provides a more emphasized way to separate sections.
\begin{frame}{\vspace{-10pt}\insertsectionhead}
\begin{center}
\Huge \insertsectionhead
\end{center}
\end{frame}
%% First slide
\subsection*{}
\begin{frame}{\vspace{-20pt}Images}\vspace{-25pt}\parskip=8pt
\begin{columns}
\begin{column}{0.5\textwidth}
\includegraphics[width=\textwidth]{nsCoverPage.jpg}
\end{column}
\begin{column}{0.5\textwidth}
\includegraphics[width=\textwidth]{bookmicro.jpg}
\end{column}
\end{columns}
\end{frame}
\subsection*{}
\begin{frame}[fragile]{\vspace{-20pt}Slide one and details}\vspace{-20pt}
\hlyellow{Highlight something yellow}
\hlorange{Highlight something orange}
\begin{block}{block heading}
block text
\end{block}
\begin{exampleblock}{exampleblock heading}
exampleblock text
\end{exampleblock}
\begin{alertblock}{alertblock heading}
alertblock text
\end{alertblock}
\end{frame}
\subsection*{}
\begin{frame}{\vspace{-15pt}Slide two with columns}\vspace{-20pt}\parskip=8pt
\begin{columns}
\begin{column}{0.5\textwidth}
use \texttt{\textbackslash subsection*{}} to obtain a dot indicator as seen on the top of each slide.
\end{column}
\begin{column}{0.5\textwidth}
use \texttt{[fragile, allowframebreaks]} to accomodate long lines.
\end{column}
\end{columns}
\end{frame}
\section{Slide Set Two}
\begin{frame}{\vspace{-10pt}\insertsectionhead}
%\usebeamerfont{title}
\begin{center}
\Huge \insertsectionhead
\end{center}
\end{frame}
\subsection*{}
\begin{frame}{\vspace{-20pt}Plots}\vspace{-25pt}\parskip=8pt
How to include images.
\begin{columns}
\begin{column}{0.5\textwidth}
\includegraphics[width=\textwidth]{someImage.pdf}
\end{column}
\begin{column}{0.5\textwidth}
\includegraphics[width=\textwidth]{someImage2.png}
\end{column}
\end{columns}
Other formats such as jpg is also supported.
\end{frame}
\appendix
\section*{Acknowledgments}
\begin{frame}{Acknowledgments}\label{lastframe}
\parskip=20pt
\vspace{-25pt}
\parbox{\textwidth}{\small \it This work was supported by Galway University Foundation, the
University of Limerick Foundation, the National Biophotonics Imaging
Platform (NBIP) Ireland funded under the Higher Education Authority
PRTLI Cycle 4, co-funded by the Irish Government and the European
Union -- Investing in your future, and Compact Imaging, Inc. All
authors have a financial interest in Compact Imaging, Inc.}
\begin{picture}(,70)
\put(0,0){\includegraphics[width=0.3\textwidth]{NUI_Galway_BrandMark_B.jpg}}
\put(218,35){\includegraphics[width=0.3\textwidth]{TOMI_small.jpg}}
\put(0,40){\includegraphics[width=0.5\textwidth]{nbipi_vector.pdf}}
\end{picture}
\end{frame}
% \section*{References}
% \setbeamertemplate{bibliography item}{\insertbiblabel}
% \begin{frame}[t,allowframebreaks]{References}
% % \frametitle{\insertsectionhead}
% \renewcommand*{\bibfont}{\tiny}
% \printbibliography
% % \bibliography{/home/webster/zotero_exports/speckle}
% \end{frame}
\section{Some Appendix Slide}
\begin{frame}{\vspace{-20pt}\insertsectionhead}\vspace{-20pt}
some appendix
\end{frame}
\end{document}